$174,500 – $196,700/yr

Principal Scientist / Associate Director, Biochemistry

OtherAssociate
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Overview

Principal Scientist / Associate Director, Biochemistry About Treeline Treeline Biosciences is an innovative biotechnology company,

Technical Tools
OtherAssociate

Treeline Biosciences is an innovative biotechnology company, founded by an experienced team of biopharmaceutical scientists and executives, committed to developing new medicines against difficult to drug targets in cancer and other life-threatening diseases. We are pursuing a uniquely integrated approach that applies modern and emerging tools to facilitate hit finding and lead optimization to develop therapeutics for previously undrugged targets.

About the Role

~1 min read

We are seeking a highly motivated Biochemist (Principal Scientist through Associate Director) to join our drug discovery team in Watertown. This role will work with a focused team of biophysicists, biochemists, structural biologists, and chemists to enable early hit finding activities. The candidate will design and execute experiments to support 1-2 programs at any one time. We are seeking someone who enjoys working in the lab and is excited to work on a wide range of activities: mechanistic exploration, HTS screens, Hit finding/Lead-op assays, etc. The successful candidate will combine enzymology and biochemistry expertise with quantitative modeling, strong experimental skills in the lab, and an ability to communicate and collaborate across multi-functional teams. At the Associate Director level, this role will include setting the strategy for and managing the Biochemistry team, defining drug discovery strategies, understanding mechanisms and advancing our early drug discovery portfolio.

You thrive in a fast-paced and matrixed discovery environment requiring scientific curiosity and rigor. With a drive to succeed, you are creative, diligent, and meticulous in approaching difficult scientific challenges and collaborate across multiple disciplines to move programs forward. You have an eagerness to take on responsibilities outside of your function and push the limits on how Biochemistry is used for small molecule drug discovery. For an Associate Director level role, you are an experienced manager and thrive from empowering your team and colleagues. You can effectively communicate complexities of data to your peers in lead discovery but also digest data effectively to broader audiences.

Responsibilities

~1 min read
  • Lead and execute mechanistic investigations of drug targets using kinetic, thermodynamic, and chemical biology approaches. Characterize mechanisms of action for screening hits, tool compounds, and lead molecules.
  • Build and use kinetic and mechanistic models to quantitatively predict and interpret experimental outcomes.
  • Integrate mechanistic data with structural biology, medicinal chemistry, and cell-based readouts to prioritize follow-up chemistry and propose assay and compound-optimization strategies.
  • Design and implement robust assays for hit finding and high throughput screening, including primary biochemical assays and downstream assays for hit triage and binning.
  • Develop and maintain robust, high-quality assays and SOPs; ensure reproducibility and rigorous data analysis.
  • Communicate findings clearly to colleagues and stakeholders through written reports and presentations to cross-functional project teams.
  • Flexibly utilize the full breadth of your skills outside of biochemistry to support projects.
  • Provide biochemistry leadership on project teams and propose and evaluate new approaches and technologies.
  • Manage a team of biochemists to support portfolio activities while providing mentorship and developing your group members.

Requirements

~2 min read
  • PhD in Enzymology, Biochemistry, Biophysics, or related discipline with 7+ years of experience in biotech/pharma industry or MS with 12+ years of relevant industry experience
  • Track record for biochemistry leadership and support for hit-finding, hit-to-lead, and lead optimization to delivering small molecule development candidates.
  • Experience in small molecule drug discovery, specifically biochemical assay development and characterization of small molecule inhibitors and protein-ligand binding interactions.
  • Training and hands on expertise in mechanistic enzymology, kinetics, binding assays, and mechanistic deconvolution with a proven track record of high impact applications to drug discovery.
  • Track record of translating mechanistic insight into practical strategies for hit identification, hit triage, lead selection, SAR interpretation, or assay design.
  • Experience designing and optimizing a wide array of steady-state and pre-steady-state biochemical assays, both enzymatic and binding, such as FP, TR-FRET, and bead-based.
  • Direct experience in working with and targeting challenging proteins.
  • Strong written and oral communication skills, excellent interpersonal skills, with demonstrated ability to work collaboratively on multidisciplinary teams.
  • For AD level: 3+ years of management experience, with a track record in building and managing a team of scientists with diverse levels of experience, with a keen desire to grow and develop the careers of team members.

This position is classified as exempt. The anticipated annual base salary range for candidates who will work in Watertown is $174,500 to $196,700. The final base salary offered to the successful candidate will be dependent upon several factors that may include but are not limited to the type and length of experience within the job, and other factors. Treeline Biosciences is a multi-state employer, and this salary range may not reflect positions that work in other cities or states.

 

  • Treeline Biosciences will never ask for money from you as part of our recruitment process. Do not provide bank details or pay somebody for the promise of a job at Treeline.
  • We do not conduct interviews through RingCentral, Skype or Telegram.
  • Our job openings are first posted to treeline.bio/careers. If you locate a listing for a Treeline job on another site, please ensure it is also posted on our careers website.
  • You can find more information about job scams at consumer.ftc.gov/articles/job-scams.
  • To report job scams, head to ReportFraud.ftc.gov.

 

The Human Resources team manages the recruitment and employment process for Treeline Biosciences. To protect the interests of all parties involved, Treeline Biosciences will only accept resumes from a recruiter if an executed search agreement directed to the particular position or positions is in place at the start of the recruitment effort. Unsolicited resumes sent to Treeline Biosciences from recruiters do not constitute any type of relationship between the recruiter and Treeline Biosciences and do not obligate Treeline Biosciences in any way to pay fees should we hire from those resumes. Recruiters are requested not to contact or present candidates directly to our hiring manager or employees.

Location & Eligibility

Where is the job
Watertown, United States
On-site at the office
Who can apply
US
Listed under
United States

Listing Details

Posted
April 17, 2026
First seen
April 17, 2026
Last seen
May 4, 2026

Posting Health

Days active
17
Repost count
0
Trust Level
39%
Scored at
May 5, 2026

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Principal Scientist / Associate Director, Biochemistry$175k–$197k